Home
Browse
Blast
Tools
Download
Help

Basic information


Strain: Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)

T3SS: Ham2-c     T3SS_Category: IIId

Genome_ID: NC_012751.1     Strand: -     Coordinate: 2023253..2024311

Locus_Tag: HDEF_RS10095


Gene information


Gene_name: SctU     Gene_acession:

Nucleic acid sequence:

ATGCCTGAAAAAAACGAAAAACCTACAGAGAAACGCATAAAAGAATCCCGGGAAAAGGGAGAGGTCATTAAAAGTGTCGA
AATTACTTCAGGCACACAATTGGCCATTATTCTCATTTATTTTTCATTAGTCGGGCCTAATCTAGTGAATTTGATGGGTC
TTTTAATTACCAGTAGTATAAAAAAATTAGATAAACCTATAGGCATTGCGGTACTCGATCTGACCTCTGAAATAGCCAGT
GTGTTTTTACAGATTATGGGAGTATTAGGAGGGGGATTAGCATTAGCGACCATACTGGTCGTTATGTCACAGGTTGGCCC
TCTACTCGCAATCAAAGCAATCGGTTTTAAAGGCCAACATATCAATCCTATCAGTAATTTTAAAAATTTGGTCTCCCTCC
GCAGCTTGTTTGAAATTTGTAAATCATTATTTAAAGTGATTTTAGTCTCTTTAATTTTTGCTTATCTACTTCGCGAATAT
GCACCTACCTTTGGATATTTATCGTATTGTGGCACTCATTGTGCTTTTCCGATATTTGGTACTTTAATGCAATGGTTGCT
GGGATCTTTGCTCGCGTGTTACGTGATATTTGGTATCTTGGACTACAGCTTTCAGCATTATAACACCATGAAAAAAATGA
AAATGTCCCGTGAAGAAATCAAACGTGAATACAAAGATACCGATGGTGATCCTGAAATAAAATCTAAACGTCGAGAATTA
CAACAGGAAATTCAAAGCGGAAGCCTCTCTAATAAAGTCAAAGGCTCAACCGCAGTGATTAAAAATCCCACTCATTTTGC
GGTGTGTTTATTTTATCATCCAGAAGAAGCGCCACTACCTATCGTGCTTGAAAAAGGAAAGGGAACAAGGGCTCAGACCA
TTATTAAATTAGCCGAAAAATTTGATGTGCCAGTGGTTGAAAATGTGAGACTCGCGCAAATGCTACATAATGAAGTGAAT
TGTGATGAAATTATCCCCGAGCATCTTTTTGAACCTGTGGCGGCGATATTACGTTTTGTCTTAAATTTAGAATATCAAGC
CGATGATGAATCAACATAA


Protein information


Protein_Function: Apparatus     Protein_acession: YP_002924937.1

Protein sequence:

MPEKNEKPTEKRIKESREKGEVIKSVEITSGTQLAIILIYFSLVGPNLVNLMGLLITSSIKKLDKPIGIAVLDLTSEIAS
VFLQIMGVLGGGLALATILVVMSQVGPLLAIKAIGFKGQHINPISNFKNLVSLRSLFEICKSLFKVILVSLIFAYLLREY
APTFGYLSYCGTHCAFPIFGTLMQWLLGSLLACYVIFGILDYSFQHYNTMKKMKMSREEIKREYKDTDGDPEIKSKRREL
QQEIQSGSLSNKVKGSTAVIKNPTHFAVCLFYHPEEAPLPIVLEKGKGTRAQTIIKLAEKFDVPVVENVRLAQMLHNEVN
CDEIIPEHLFEPVAAILRFVLNLEYQADDEST