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  • Basic Information
    TxSEdb_ID: T3SE_00483
    Protein_Name: sopD
    Protein_Acc: NP_461866.1
    Gene_Name: sopD
    Gene_LocusTag: STM2945
    Gene_ID: 1254468
    Genome_ID: NC_003197.2
    Gene_Coordinates: 3087148 - 3088108
    Protein_Other_Acc: NP_461866.1
    Category: -
    Species|Genus: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
    Strain: LT2; SGSC 1412; ATCC 700720
    Protein_Sequence:
    MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
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    CDS_Sequence:
    AAATATTATGCCAGTCACTTTAAGCTTCGGTAATCATCAAAATTATACGCTTAATGAAAGTCGGCTTGCTCATCTGTTAAGCGCAGATAAAGAAAAAGCAATCCATATGGGGGGTTGGGATAAAGTCCAGGATCATTTTAGAGCGGAAAAAAAGGACCATGCGCTGGAAGTGTTACACTCCATCATTCACGGGCAGGGCCGTGGTGAACCTGGAGAGATGGAAGTTAACGTAGAGGATATAAATAAAATTTACGCCTTTAAACGGCTACAACATCTGGCCTGCCCGGCTCATCAAGATCTGTTTACTATCAAGATGGACGCTTCTCAGACACAATTTTTACTTATGGTCGGCGACACGGTGATCAGCCAAAGCAATATTAAGGACATCCTTAATATATCAGATGATGCAGTGATAGAATCTATGAGTAGAGAGGAGAGACAATTATTTTTACAAATATGTGAGGTGATTGGTTCGAAGATGACCTGGCACCCGGAATTACTTCAGGAGTCGATTTCAACTCTACGAAAAGAAGTGACGGGAAATGCACAAATCAAAACGGCGGTTTATGAGATGATGCGTCCCGCAGAGGCTCCAGACCACCCGCTTGTCGAATGGCAGGACTCACTTACTGCAGATGAAAAATCAATGCTGGCCTGTATTAATGCCGGTAACTTTGAGCCTACGACTCAGTTTTGCAAAATAGGTTATCAGGAGGTACAAGGTGAAGTCGCTTTTAGCATGATGCATCCGTGCATCTCCTATTTACTACATAGCTATTCACCGTTTTCAGAGTTTAAACCAACAAATTCTGGTTTTTTAAAAAAACTTAATCAGGATTATAACGACTATCATGCAAAAAAAATGTTTATTGATGTAATTCTTGAAAAACTATATCTAACCCATGAACGTTCTTTGCACATTGGTAAAGATGGGTGCAGTCGTAATATATTACTGACATAA
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    Promoter_Sequence:
    CCGCTGAGAAATCAGCTCTGTTTGTGTGACCTGAGTCAGCCAGGGATAATCGTCATGGCCTAGCAACGGCGCCTGCACACTACGCCTCACCCCACGGGAAAATGCCGCCACCAGCTTATCTCGCTGCTGCTGCGATAGCGTCGCAGATAACAGAATAGTGGCGTTGCCATTACTGGCCTGCCGTTCGATCAAACCTTCAAGTATTCGGGACATCCAGGCATCACAGGCATGGATCTCATCAGCCAGTAAGATCTTGTTGCTAAGACCCAGTAACCGCAGGTTGTTATGTTTAAATGGCATTACCGCCATCATCGCCTGATCCAACGTGCCTACGCCAACCTCCGCCAACAACGCTTTTTTATTGCTGTCGGCAAACCAGGCGGCGCATCCCTGACTATAAGGCTGCGCTTCATCGGGTTCTTCCGTACCAGAAAGAGTGACCGACCATATTGACTGATTGAAACGATCCATTAAGCGACGCGCGCTATGCGCCAGAATCAGGCTGGGACGGGAGTCCGGCTGATACAGCGCCAGCCAGGTGTTCGCCATACGTTCAAACATCGCGTTGGCTGTCGCCATTGTCGGCAGTCCAAAATAGAGTCCCTGCGCTTTACCTGCCGCCATCAGTCGATGAGCTAATATGAGCGCCGCCTCTGTTTTTCCGGCCCCGGTGACATCTTCAAGAATAAAGAGTTGGGCGCCATCCACGTTGATATCCAGCTCAAGCGCCTTTTGTTGTAACGGTGTGGGATGCTGAATAAAAGGGAAAAGCGTTTCTATGCCCGTAAAGGCAGACACATTCGCCGCTGAGGGAAATAGCGTGATGGCAGTTTGTGCTTTAGCGAGAGCTTGCTGCCAGTAGGTATCAACAGGCATTTTTTCCGCAGTACGCGGAAAATAACGGCTGGCAGAACCAGTCCAGTCAGCCAGTACAACCGCAGCGGAAATAAACCAGGAAAGTTGCTGAAATTGGTCGATACCCTCATCTTCATCCCAGGCTTCAGGCAAAGTAATTAAAGGAAAGAGCGCTTTTATTCTCAGAAGAAAATCTCTTGCCGCGTCTTTATCCTGCTGGCGAAAATGGTCCAGCTCCTGGATTGCCTCTGGAGGGCGTCCATGATGACCTGTAGTGACTGGCATCCAAAGCGCCATAACGCGCTTACTTTTACGAACTGAAAGCGAAGAAGGAGGAAACAATTCAGGGCATTCACTTAGCCAGGAGTTCCACAACATGTATCCCAGCGTGGTATGCGCGATTTTTTCATAATGCCGTGTAGGCTCATTAAAGATATTTAAAGCCTCATGACGGTATAGTTGCTGGAAGGAATGAGCAAACTTTCCAATATCATGCCAACATAAAATCCAGGCAAAAAATTGCGCCGCCTGCTCCTTATCCTGGATGCCTAATTTTTTTAGATAGTGGTCAATAAAATAAATATTATTTATCACCATCCAGTAACCCACAGCCGCAACATCTAAAGAATGCCAGCAAAGCAAATGGTAATCATCACCGCCGTCAGTTTCTCCTCGTCGAGACTTTCCCCAATAGTGATATATCGACACGTAAACTCCAGCATGTGGATAATAAAAGCACTCTACGCCTTTTTAATGGTCTTTTTTGTTGATATACCTCACAAAAATTGCACTTCCTGAGATTATATTTAAATATGCCCGCTCAATTTTATATATTCTTCAGAAATATTTACCCCACGAATAATTATTATAAATTTTTCCGCCTTTTTCTTCTGGAAGAAGCGCTCAAAGAGGCTTCCTCCAATGCCTTCTGCATAAACCAAAATTTAAAAAAAACGACCATTTGCGGCGAATCATCTACCTTTTGTCTGAATTATCGTCACCACAAAGGATTACCAACCATAAATGTGCTGTATTAATAATGTCGTTCAAATTCTCTCCTGTAGTAAACTTTATCTGTTTAATAAAAAAGAGAGAATTGAACGATATATTTTACTCCGGATATTGAATAATATAAATTTGAAGGA
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    PMID: 20185511   17696999   15554961   15134655   
  • Intra-host Subcellular Localization
    ID: Sal_SPI1_SopD
    Prot_type: T3SE
    Prot_name: SopD   
    Major_Category: Substrate
    Genus: Salmonella
    Species|Strain: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
    SecSytem: SPI1-c   
    Prot_Accession: NP_461866.1
    Reference: 20185511   17696999   15554961   15134655   
    Gene_Locus: STM2945
    Subcellular_localization: Membrane   Cytoplasm   
    Sub_loc_ref: 17696999    


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HCD Laboratory
Shenzhen University Health Science Center
Email: wangyj@szu.edu.cn