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  • Basic Information
    TxSEdb_ID: T3SE_00243
    Protein_Name: HopD1
    Protein_Acc: NP_790715.1
    Gene_Name: HopD1
    Gene_LocusTag: PSPTO_0876
    Gene_ID: 1182505
    Genome_ID: NC_004578.1
    Gene_Coordinates: 946222 - 948339
    Protein_Other_Acc: NP_790715.1
    Category: -
    Species|Genus: Pseudomonas syringae pv. tomato str. DC3000
    Strain: DC3000
    Protein_Sequence:
    MNPLRSIQHNIATPPISGGQPLDAVGPQAQQSHPKRISPSQLSQSAHQALERLSANAEHQRLASLVRNALQDGTFQFQSSNHTQVTYKASICLPADTDTVRTDHLINNELTVQARLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHLGMSRVLSQDAVDSSSLETPLLSSPDHSRPPSQPKPVHIGSVRRDSGSLVSDNPVVQALLSFAQADQAFPPQAASIAGVQLEMRPRRDIEKALEEFKGAFTVVKAQLMSGANSSERVDEDVNADIHIPLLLKAIERGAAAFGPNASIGQNSAKAFLASCAPKITSNDDVLSEFINQKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQYALQLAGIDSVPPLIIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAGAISSVVSFPNNVLQYAGFKSRVGDLAANSVTTEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHSGEGVDTKKTIERMTRHALDIAPGESTAVKSMGLASIVGMIPLIASNKATGLLSEQVLRIFRSAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVVQTILARASQHMEAGDRDISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP
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    CDS_Sequence:
    ATGAATCCTCTACGATCTATTCAACACAACATTGCAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCGGTGGGCCCTCAGGCCCAGCAATCCCATCCTAAAAGGATTTCACCTTCTCAATTGAGCCAAAGCGCTCACCAGGCTCTAGAACGCCTTTCAGCTAATGCCGAACACCAACGCCTTGCATCACTGGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGTAACCACACGCAAGTAACCTATAAAGCGTCAATCTGTCTGCCAGCTGACACCGATACCGTGAGAACCGACCACTTGATTAATAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAATCGGAGTACGACATCGTCAGCGCACATTTGCATGGCTCTTCGAAAGCCATATCCTTCGACGTACCCAGCCCCCCGCCCGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACGGACCCATCTAGGTATGAGTCGCGTTCTCTCACAAGATGCAGTAGACAGCAGTAGCCTGGAAACTCCGTTACTGAGCTCGCCAGACCATTCTCGTCCGCCATCACAGCCAAAGCCCGTGCATATCGGGTCGGTCCGCAGGGACTCTGGTAGCCTTGTTTCCGATAACCCGGTAGTGCAGGCCCTGCTATCGTTTGCGCAGGCCGACCAGGCATTTCCACCACAGGCCGCGAGCATTGCCGGGGTCCAGCTGGAAATGCGGCCACGTCGGGATATTGAGAAAGCACTTGAGGAATTCAAAGGCGCCTTCACGGTGGTGAAGGCGCAACTGATGTCCGGTGCCAACTCGTCGGAGCGTGTAGATGAGGATGTCAACGCAGACATCCATATCCCCTTATTGCTCAAGGCCATCGAGCGGGGGGCTGCGGCATTTGGTCCAAACGCATCAATCGGCCAGAATAGCGCGAAAGCGTTTCTCGCCTCATGTGCTCCCAAGATCACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCAGAAACTCAAGGGGGACGACGATCTTCAGGTTCGCCTGGGCGCACAGGAATTGTTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCCGGCAGCATCGGGGTCAGCAGCATACTCGGCTCGGCATGGGAGCTTGGCGCTTCTGAGCTGTTGAAAAATGCCATCTTCGGCAAAAATTTCTCACCGAGCCAATATGCCCTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTGATTATCGAGTCCATGGACACCATGTGCGTACTTGCCATCATCAAGGGCATGAAGGGTGAGGAGTGGTCCATGAGCGATCTACTTCCCAAGGCGTTGAAGGCCGGTGCTATTTCCTCGGTGGTGTCATTCCCCAATAATGTTTTGCAGTATGCAGGTTTCAAATCCAGAGTCGGCGATCTTGCGGCAAACTCAGTGACAACTGAAGCGGCCATCTTTGGCGCCGCCTCCGGTATTCCACCCGAGGTCAAGGAAAGTGAAGAGCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTCATTCAGGCGAGGGGGTGGACACCAAAAAAACGATTGAGCGGATGACGCGCCATGCGCTGGATATCGCTCCGGGCGAAAGCACCGCTGTCAAGTCCATGGGGCTGGCATCGATTGTCGGGATGATTCCACTGATTGCCAGCAACAAGGCAACCGGGCTGCTGTCGGAACAGGTACTGCGTATTTTCCGGAGCGCCGTCTTCAATCCAATCGAAGCCATCGCTCTGAACGCGTTGGCGCTTGGCGGGCGTGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCCAAGCATGCACGCGTGGTACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGTGACATTTCCGCAGAGGAGCTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTGGGATCTGCGATTGTCAACGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATATGGTGAGGCTCCATTGGCCGAACGTATTCCGTATCAAGACCTGGCTGTGCCCGACACGTCGCGGCAGCCCGCACCCTGA
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    Promoter_Sequence:
    AGCGCTTTACGTCACTCAGATTTTCTTGCCCCCCCTCGAAAGCATGCCGACCTTGAGAACCCACGTAGTGCCGGCTCTAGGTGACATCGCATCAGGTGAATTCTACTGTTACAAGGATTCGCTGGGATCCTTCGTATTTTGTGGAGACCGTGACCTTGTCTCACGGGATGTGCACTACCTGAGCGAACATTACTCGGTAAAGGTCGCCGCGAAAAACAGCCCTCCGTTTGAGGAGTGACATTCCCCTTTGCACAATTAATGATAACCACATTTAAAAGAGCTGTTAGGTCATGGACAAAAATAAGCCAAACACTATTCTGATCGTCTCTTCCGAACTGGATGTAAGCGAGGTGGTCTCCCGAATCAGGAGTCTCTACCCGATCGATGCCTGGACGTTCATCTACCTTCTGGAGGATCTTCTGGGGCAGGCGGGAGAGGCGCTGAATCGCGATGGACACTTTGTGATCCGAGACTTTGCCGTTCACACCGAGGTCGAAAAGGTATTCGGCCAGATTGCAAGGAAATATTCCGTCACCGCCGTCATTCCGAATGACGAGTTCGCGGTATACATTGCTGCATGGGCCAACGACTGTTGGCAGCTGCCTGGATTGACTTTTGACGTGGCGACACGGTTTCGTGATAAAAGGCGAATGAAAAAAATTGCCCAAAAGTTTAATATCCCGACAGCAAAAGAACTATCGCTTGATGATATTAACCGTGGAGGGGCGACGTTTCCGGTTATTTTGAAACCTCGGTCTCTGGCGGGATCTGTAGGGGTCAGAATCATTACTGAGGTCCAGCAACTTTCTGAGGCATATGCCACCGAAATTGATGACTATCAGGATATGAATGAGCACCAGTATCTTATTGAAACTTACAACTCACAACCCCTTTATCAAATTGATGCTGTGGTTCTAAAAGGGCAGCTGGCGTTCCTGTCTGCAGGTAAGTACCTAGGTAAACCCATCGATTATCTGGCCGAATGTCCACTGGGATATTTTTCACTTGCTGAAGACGATCTACACACCCTATGGCGTCCATTCATCGAGCGAGTGTTGTCCGCTTTTGAAGGGCCTGATGGTGTTTACCATATTGAAGCGTTTGGTGATGCGGGCGACGGATTTGAATTACTTGAGATTGCCTATCGGCCCGGTGGGGCTTCCACTGTCGATATGATAAAAATCGCTTATGGAATAGACCTGCGTTTCATTCATCTTGCCGTCCAGTTAGGGCTTGTCGATGCCTTGCACGTTGACCGTAAGGGCGAGGCCTTTGGCTATATGACGTTCCCTAAAAAACACTTGGCCAAAGAAATGCTTTATGTCACTCGGGTTTCACTGTCGAGTATGGAAACCCTGCAAACACTGAAGATGAAGAAAATTGCGCAGGTAGGCGATATCGCTTCAGGTGAATTTTTCTGCCACAAGGATTGTTTGGGGGCCTTTGTATTCTGTGGCGATCGAGGCAGCGTCGCTCATGACTTGAAGCATGTTGAGGAGCATTATCAAGTGCATGCAGAAGCTGCGCGTGGTTGATAGACAGTACCCGTCCGGGCATCCCGGCTTGAATCAAACCGGTCGCAAGTTATGTGGCAGCAACTGATCTGTCTTGCATCGCCCGATGCATCGGCTGGCGCGTGAGAACCTTCCTTAAGTGTAGCGGCTTGCAATCGGAAACGACCGTGCTCGCAATCAGCACACTTTTCGGCTCAGATTAACTGCGGCTGACGCAGCCCTCTGGCTCACATTAGTTGCGAGCGAGCTTGCATTCAACTGCCTCTGCTTGCATTACATCGCTGGCAACTCACATTAGCTGCGAGTGAAAATGAGCGGGGCAGATTGGCAAATCCGCCGCGAGCATTTCGTCGCGCAGTGTGTCCATGTCAGTGGTGTGCTTCCCGCTCGACGCATTCGCCGGTTTTGAGTCTGTCTTTGGAACCCAAGAGCCCTTGCGACCACACATTGGATCCGATTACTTCATCCGGGACAGCTGATAGCGCT
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    PMID: 24329768   
  • Intra-host Subcellular Localization
    ID: Pse_Pse2_HopD1
    Prot_type: T3SE
    Prot_name: HopD1   
    Major_Category: Substrate
    Genus: Pseudomonas
    Species|Strain: Pseudomonas syringae
    SecSytem: Pse2-c   
    Prot_Accession: NP_790715.1
    Reference: 24329768   
    Gene_Locus: -
    Subcellular_localization: Endoplasmic Reticulum   
    Sub_loc_ref: 24329768    


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Shenzhen University Health Science Center
Email: wangyj@szu.edu.cn