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  • Basic Information
    TxSEdb_ID: T3SE_00482
    Protein_Name: sopB
    Protein_Acc: NP_460064.1
    Gene_Name: sopB
    Gene_LocusTag: STM1091
    Gene_ID: 1252609
    Genome_ID: NC_003197.2
    Gene_Coordinates: complement(1178219 - 1179912)
    Protein_Other_Acc: NP_460064.1
    Category: -
    Species|Genus: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
    Strain: LT2; SGSC 1412; ATCC 700720
    Protein_Sequence:
    MQIQSFYHSASLKTQEAFKSLQKTLYNGMQILSGQGKAPAKAPDARPEIIVLREPGATWGNYLQHQKASNHSLHNLYNLQRDLLTVAATVLGKQDPVLTSMANQMELAKVKADRPATKQEEAAAKALKKNLIELIAARTQQQDGLPAKEAHRFAAVAFRDAQVKQLNNQPWQTIKNTLTHNGHHYTNTQLPAAEMKIGAKDIFPSAYEGKGVCSWDTKNIHHANNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRHVGAENKAKEVLTAALFSKPELLNKALAGEAVSLKLVSVGLLTASNIFGKEGTMVEDQMRAWQSLTQPGKMIHLKIRNKDGDLQTVKIKPDVAAFNVGVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYPDNYEVVNTLARQIKDIWKNNQHHKDGGEPYKLAQRLAMLAHEIDAVPAWNCKSGKDRTGMMDSEIKREIISLHQTHMLSAPGSLPDSGGQKIFQKVLLNSGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKRVGDENIWQSVKGISSLITS
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    CDS_Sequence:
    AAAACGCTATGCAAATACAGAGCTTCTATCACTCAGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGCCTACAAAAAACCTTATACAACGGAATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCTAAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACCCGGCGCGACATGGGGGAATTATCTACAGCATCAGAAGGCGTCTAACCACTCGCTGCATAACCTCTATAACTTACAGCGCGATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCAATGGCAAACCAAATGGAGTTAGCCAAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAAGAAGCCGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTATTGCAGCACGCACTCAGCAGCAGGATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGATGCTCAGGTCAAGCAGCTTAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCATAACGGGCATCACTATACCAACACGCAGCTCCCTGCAGCAGAGATGAAAATCGGCGCAAAAGATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTGGGATACCAAGAATATTCATCACGCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAAACGCTTTTTTGCGGGATACGTCATGGCGTGCTTTCCCCCTATCATGAAAAAGATCCGCTTCTGCGTCACGTCGGCGCTGAAAACAAAGCCAAAGAAGTATTAACTGCGGCACTTTTTAGTAAACCTGAGTTGCTTAACAAAGCCTTAGCGGGCGAGGCGGTAAGCCTGAAACTGGTATCCGTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACGATGGTCGAGGACCAAATGCGCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAATAAAGATGGCGATCTACAGACGGTAAAAATAAAACCGGACGTCGCCGCATTTAATGTGGGTGTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAGGCATCGGATAGCTATAATGCCGAGGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGGGTTGGCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGCCAGATTAAGGATATATGGAAAAATAACCAACATCATAAAGATGGCGGCGAACCCTATAAACTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGTACCCGCCTGGAATTGTAAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGATCATTTCCTTACATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAAATTTTCCAAAAAGTATTACTGAATAGCGGTAACCTGGAGATTCAGAAACAAAATACGGGCGGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCTCAATCTTTCCTATCAAAAACGAGTTGGGGATGAAAATATTTGGCAGTCAGTAAAAGGCATTTCTTCATTAATCACATCTTGA
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    Promoter_Sequence:
    GGCGAGTATAAAGCACATCGGAACAATTTTAGCTGGCCGCTTCCGGAGACAGCGATGCGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGGCGGGCGTCGGAATGAGCGCAACGGAAACCATTTATAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACGGGAATCACGGAAGACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGATATTATTGAACAAAAAGGCGCGGGCGAAGGTTTCGGCGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGGGAAGCGGTCATCAATGGCTGGCAGTACGACTTCCGGCAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGCCATTACGATCCGAATGATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCCGGCCCGCGGCGAATTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATACCACCTATAATTATCCGCGCGTCTGGACGCTACAACACCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTCCTGTTTTTTTAACGCCAATAACGAAGATCAGCGTGGCGGCAGTAAAAAACGCGCTACGCAATCACTATCAGGGAACGTCGCACGACCCTTATGCCAGTCATAATCCACAAGAACCATGGCGACCTATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAATTACCGCAGGCTATCGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTATCAGGGGATGCGTCATTATCAACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCTGCAAACGCTGGTTATGCAGGACTACAATGCGTTTGCGCCAGATGTGCAACACGCCTGGAAAACATTTGAACAGCAAACAGCTAAGCAGCAGTATAAGATGGAGCAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCGCAACGCTTACTGCAAAATTTTGAAGATAAAACGATGCAAAATGCGCAGACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTACCGTACAGATATGAAATATCACTTTTCAAGTACGCAGCCATAAATTTAATGACAATCTATTAGCCACTCATACACAATAAGATAAAGCGGTACCAGAATTAGCCAGATATAAAAGACAATAATTATTATGGATTCATAGAGAGGATAGTTTATGACACTCCAGGCAAATATCAGCAGAGAGACAAAAGCGGCAAAAACCCAGGAGGTATATAAGCACGTTGTTCTTTTCAAAATGGCCGCCCCCTCTTACATAAGACGATAACTACAGCTTATGTCCCGTGTTACATAACTTTTCCCGACAGGCCTCTTTTACCCATGCTGAAAAATTCCGCGTCTTTTCAGATTTCAACGCGAATTCTATCTGTTCAAGCATGGAATAGGAAAAACGAATATTCTTCGTCACGGTCTTACTTGTCCGGGGCTTTGCTGGCATACACACACCTGTATAACATTTGATGTAACGCCGTTACTTTACGCAGGAGTAAATCGGTGAATTTGATCTGAGTCAAGAAGGTGGGTTTTCAATAAAAGTTGTGCCATAAATTGTGAAGTTTGTAGATTTTATGAACATTTGATGTACCGATCTCCCCCATGATCGCCACTACGTATGGACGTCAGGATGCCTCCCCGCCTGATCAGAAGCGTTTCCTCATTAAAAAGGACATTTTTTTAAAGTTCCTGGTGCATAAAAGTCACATCCTTTTAAAGGGTTGTTAACCCTGTTGAATGTTCCCACTCCCCTATTCAGGAATATTA
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    PMID: 18389058   11157959   21501827   21435037   20542249   9826652   
  • Intra-host Subcellular Localization
    ID: Sal_SPI1_SopB
    Prot_type: T3SE
    Prot_name: SopB   SigD   
    Major_Category: Substrate
    Genus: Salmonella
    Species|Strain: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
    SecSytem: SPI1-c   
    Prot_Accession: NP_460064.1
    Reference:    18389058   11157959   21501827   21435037   20542249   9826652   
    Gene_Locus: STM1091
    Subcellular_localization: Salmonella-containing vacuole (SCV)   
    Sub_loc_ref: 21435037   20542249    


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